Mel-
You said you were reconnecting your "coach" batteries, and if you mean the four 6-volt batteries (aka "house" batteries), then they are wired as 2 pairs, each pair hooked together in series, and the 2 pair wire to each other parallel;  your two 12-volt chassis batteries on the other hand are just hooked together in parallel.  A pair of 6v batteries wired in series provides 12 volts together.  A pair (or any number) of 12v batteries wired in parallel provides 12 volts together.  That can be confusing, so you should avail yourself of Gerald's diagram offer to make sure things are put back together right.
One thing I did on our old 1984 gas coach when replacing batteries, to identify multiple black cables that ran from up front up to 20 feet back to the converter and generator, was to make several wraps of red electrical tape around the insulation at the ends of the positive ones, and the same with green tape (or leave tapeless if you like) around the ground cables.  An ultra-fine point Sharpie permanent marker served to write on each tape which battery it went to - just ID each battery with a number, perhaps use a white marker to write a number on each battery (white nail polish works and lasts a long time).  A simple "2 +" on the taped end of a cable would tell you that end went on the positive post of battery #2.  A "3 - " would be the cable end that went to the negative post of battery 3.  The "permanent" marker fades after a few years, so be sure to refresh the markings occasionally.
Our Beaver coach is configured such that I haven't found it necessary to ID the cables yet, but if I ever do I might try foregoing the tape altogether and just mark the bats and black cables with white nail polish.  You just have to make sure the surface you want to mark is clean.